Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HES4Q9HCC6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.78■□□□□ 0.12
HES4Q9HCC6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HES4Q9HCC6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HES4Q9HCC6 AC079598.2-202ENST00000546624 1451 ntBASIC15.78■□□□□ 0.12
HES4Q9HCC6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HES4Q9HCC6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HES4Q9HCC6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HES4Q9HCC6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 KRT17P2-201ENST00000300992 1314 ntBASIC15.77■□□□□ 0.12
HES4Q9HCC6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 FITM1-202ENST00000559294 800 ntBASIC15.77■□□□□ 0.12
HES4Q9HCC6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.77■□□□□ 0.12
HES4Q9HCC6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HES4Q9HCC6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HES4Q9HCC6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
HES4Q9HCC6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HES4Q9HCC6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.77■□□□□ 0.11
HES4Q9HCC6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HES4Q9HCC6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.77■□□□□ 0.11
HES4Q9HCC6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HES4Q9HCC6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HES4Q9HCC6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HES4Q9HCC6 KRT8P45-201ENST00000414328 1447 ntBASIC15.77■□□□□ 0.11
HES4Q9HCC6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
HES4Q9HCC6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HES4Q9HCC6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 AC073592.3-201ENST00000625118 1834 ntBASIC15.76■□□□□ 0.11
HES4Q9HCC6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 AL023284.2-201ENST00000405850 579 ntBASIC15.76■□□□□ 0.11
HES4Q9HCC6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 SLC25A1P2-201ENST00000430693 912 ntBASIC15.76■□□□□ 0.11
HES4Q9HCC6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 MIR4497-201ENST00000583208 89 ntBASIC15.76■□□□□ 0.11
HES4Q9HCC6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 AL023803.3-201ENST00000615559 522 ntBASIC15.76■□□□□ 0.11
HES4Q9HCC6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 GPAT2P1-201ENST00000444924 1672 ntBASIC15.76■□□□□ 0.11
HES4Q9HCC6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
HES4Q9HCC6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HES4Q9HCC6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms