Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 AC106820.2-201ENST00000563775 3264 ntBASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 KRT8P8-201ENST00000434750 1448 ntBASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 FEM1AP3-201ENST00000403722 1741 ntBASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 AC126763.1-201ENST00000552015 2118 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms