Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF4Q9BUZ4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF4Q9BUZ4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF4Q9BUZ4 AC067852.2-201ENST00000590513 2313 ntBASIC16.67■□□□□ 0.26
TRAF4Q9BUZ4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 AC006333.2-201ENST00000607957 2099 ntBASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 TERF1P1-201ENST00000311003 1181 ntBASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 AL137013.1-201ENST00000432946 1228 ntBASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 KRT18P57-201ENST00000443599 1254 ntBASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 AL049597.2-201ENST00000565575 961 ntBASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 AL445228.2-201ENST00000605589 952 ntBASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF4Q9BUZ4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 AC097488.1-201ENST00000507834 756 ntBASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 HLA-A-209ENST00000638375 975 ntBASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF4Q9BUZ4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAF4Q9BUZ4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRAF4Q9BUZ4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TRAF4Q9BUZ4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.64■□□□□ 0.26
TRAF4Q9BUZ4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.64■□□□□ 0.26
TRAF4Q9BUZ4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 Z98044.1-201ENST00000632503 1764 ntBASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms