Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AL032819.2-201ENST00000624543 2162 ntBASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AC090568.1-201ENST00000509499 856 ntBASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 ADAM20P2-201ENST00000515830 1273 ntBASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AC233702.5-201ENST00000584107 538 ntBASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AC008764.6-201ENST00000595909 2069 ntBASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MS4A3Q96HJ5 AC090774.4-201ENST00000578888 1372 ntBASIC16.89■□□□□ 0.3
MS4A3Q96HJ5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
MS4A3Q96HJ5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
MS4A3Q96HJ5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
MS4A3Q96HJ5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AL135905.2-201ENST00000584934 1404 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 MIR718-201ENST00000390190 70 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AC246787.1-201ENST00000392301 627 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AL353807.1-201ENST00000427475 662 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AC012618.2-201ENST00000428058 849 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AC004918.3-201ENST00000602609 925 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AL138960.2-201ENST00000625145 535 ntBASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A3Q96HJ5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AL121929.2-201ENST00000609691 1432 ntBASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 NIFKP9-201ENST00000419265 221 ntBASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AC022395.1-201ENST00000451610 895 ntTSL 2 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 BNIP3P39-201ENST00000601077 554 ntBASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AC113410.3-201ENST00000623366 203 ntBASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 HLA-A-209ENST00000638375 975 ntBASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A3Q96HJ5 AL049637.2-201ENST00000641778 930 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms