Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 RCC2P6-201ENST00000526625 1557 ntBASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 KRT18P29-201ENST00000397031 1267 ntBASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 KRT17P3-201ENST00000420566 1262 ntBASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXRED1Q96CU9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 PKD1P1-201ENST00000458669 6805 ntBASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 AC004264.1-201ENST00000608354 794 ntBASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 ITM2C-210ENST00000620962 501 ntBASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 HLA-A-209ENST00000638375 975 ntBASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXRED1Q96CU9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 AC112777.1-201ENST00000540175 1423 ntBASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 AC006058.3-201ENST00000606217 1069 ntBASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms