Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.52■□□□□ 0.24
APH1AQ96BI3 YBX1P2-201ENST00000489612 999 ntBASIC16.52■□□□□ 0.24
APH1AQ96BI3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.52■□□□□ 0.24
APH1AQ96BI3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
APH1AQ96BI3 AC006011.2-201ENST00000621313 1158 ntBASIC16.52■□□□□ 0.24
APH1AQ96BI3 AL023973.1-201ENST00000624619 620 ntBASIC16.52■□□□□ 0.24
APH1AQ96BI3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APH1AQ96BI3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
APH1AQ96BI3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APH1AQ96BI3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APH1AQ96BI3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APH1AQ96BI3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APH1AQ96BI3 AC006333.2-201ENST00000607957 2099 ntBASIC16.52■□□□□ 0.23
APH1AQ96BI3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APH1AQ96BI3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
APH1AQ96BI3 AC034236.2-201ENST00000606662 1610 ntBASIC16.52■□□□□ 0.23
APH1AQ96BI3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 AC117947.1-201ENST00000427448 529 ntBASIC16.51■□□□□ 0.23
APH1AQ96BI3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 AC112497.1-201ENST00000624824 639 ntBASIC16.51■□□□□ 0.23
APH1AQ96BI3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
APH1AQ96BI3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APH1AQ96BI3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 AL357033.4-201ENST00000617703 1807 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 RNF152P1-201ENST00000397754 604 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 AC104076.2-201ENST00000448912 469 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 AL049597.2-201ENST00000565575 961 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 KRT8P7-201ENST00000533003 1432 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
APH1AQ96BI3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APH1AQ96BI3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.5■□□□□ 0.23
APH1AQ96BI3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APH1AQ96BI3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APH1AQ96BI3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APH1AQ96BI3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.49■□□□□ 0.23
APH1AQ96BI3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APH1AQ96BI3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms