Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC034236.2-201ENST00000606662 1610 ntBASIC20.05■□□□□ 0.8
SEMA4DQ92854 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 KRT18P22-201ENST00000402024 1347 ntBASIC20.04■□□□□ 0.8
SEMA4DQ92854 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 AC112777.1-201ENST00000540175 1423 ntBASIC20.04■□□□□ 0.8
SEMA4DQ92854 KRT8P50-201ENST00000562022 1438 ntBASIC20.04■□□□□ 0.8
SEMA4DQ92854 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.04■□□□□ 0.8
SEMA4DQ92854 AC073592.3-201ENST00000625118 1834 ntBASIC20.04■□□□□ 0.8
SEMA4DQ92854 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA4DQ92854 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 AC099343.3-201ENST00000605834 2503 ntBASIC20.03■□□□□ 0.8
SEMA4DQ92854 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 HMGA1P5-201ENST00000412453 271 ntBASIC20.03■□□□□ 0.8
SEMA4DQ92854 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 AC097493.4-201ENST00000641197 219 ntBASIC20.03■□□□□ 0.8
SEMA4DQ92854 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA4DQ92854 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA4DQ92854 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 AC211429.1-201ENST00000415277 523 ntBASIC20.02■□□□□ 0.8
SEMA4DQ92854 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.02■□□□□ 0.8
SEMA4DQ92854 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 MYLKP1-201ENST00000509077 1580 ntBASIC20.02■□□□□ 0.8
SEMA4DQ92854 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA4DQ92854 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.02■□□□□ 0.79
SEMA4DQ92854 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.02■□□□□ 0.79
SEMA4DQ92854 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA4DQ92854 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA4DQ92854 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA4DQ92854 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA4DQ92854 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA4DQ92854 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA4DQ92854 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA4DQ92854 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.01■□□□□ 0.79
SEMA4DQ92854 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms