Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 AC133681.1-201ENST00000465482 601 ntBASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 KRT18P29-201ENST00000397031 1267 ntBASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 KRT16P5-201ENST00000455284 522 ntBASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 C1QBPP2-201ENST00000528754 825 ntBASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 C1QL1P1-201ENST00000568105 661 ntBASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 AC110285.5-201ENST00000611501 352 ntBASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 ITM2C-210ENST00000620962 501 ntBASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.71■□□□□ 0.11
RTN4IP1Q8WWV3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 AC067852.2-201ENST00000590513 2313 ntBASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN4IP1Q8WWV3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 PKD1P1-201ENST00000458669 6805 ntBASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN4IP1Q8WWV3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms