Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 MIR564-202ENST00000385049 94 ntBASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 CYP2D8P-201ENST00000433633 1490 ntBASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 KRT18P22-201ENST00000402024 1347 ntBASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 WWOX-216ENST00000569818 525 ntBASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 AC034236.2-201ENST00000606662 1610 ntBASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRFBP1Q8NEF9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 AP000593.1-201ENST00000393668 712 ntBASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 KRT18P41-201ENST00000518924 1277 ntBASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 KRT8P7-201ENST00000533003 1432 ntBASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 KRT8P9-201ENST00000558927 1449 ntBASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.77■□□□□ 0.44
SRFBP1Q8NEF9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRFBP1Q8NEF9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SRFBP1Q8NEF9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRFBP1Q8NEF9 LINC01568-207ENST00000641790 1380 ntBASIC17.77■□□□□ 0.43
SRFBP1Q8NEF9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRFBP1Q8NEF9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 KRT8P45-201ENST00000414328 1447 ntBASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 HMGA1P5-201ENST00000412453 271 ntBASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 AC073912.3-201ENST00000624414 853 ntBASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms