Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 KRT16P5-201ENST00000455284 522 ntBASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 AC008556.1-201ENST00000610908 2040 ntBASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC170Q8IYT3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 AC138028.4-201ENST00000564984 1845 ntBASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 GNAS-203ENST00000306120 1878 ntBASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC170Q8IYT3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 AC131212.4-201ENST00000623606 975 ntBASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC170Q8IYT3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 KRT17P3-201ENST00000420566 1262 ntBASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 AC069544.1-201ENST00000609399 999 ntBASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms