Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 NUDT16P1-203ENST00000513809 620 ntBASIC17.26■□□□□ 0.35
VRK2Q86Y07 SLC25A1P4-201ENST00000567977 778 ntBASIC17.26■□□□□ 0.35
VRK2Q86Y07 AC008622.2-201ENST00000617006 1229 ntBASIC17.26■□□□□ 0.35
VRK2Q86Y07 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 ABHD17AP1-201ENST00000358206 933 ntBASIC17.25■□□□□ 0.35
VRK2Q86Y07 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 AC116562.2-201ENST00000507042 360 ntBASIC17.25■□□□□ 0.35
VRK2Q86Y07 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK2Q86Y07 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK2Q86Y07 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 MFAP1P1-201ENST00000442257 1255 ntBASIC17.24■□□□□ 0.35
VRK2Q86Y07 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 AC008556.1-201ENST00000610908 2040 ntBASIC17.24■□□□□ 0.35
VRK2Q86Y07 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 AC096733.2-201ENST00000609937 1394 ntBASIC17.24■□□□□ 0.35
VRK2Q86Y07 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK2Q86Y07 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK2Q86Y07 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms