Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRD3OSQ6XYD6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 MIR564-202ENST00000385049 94 ntBASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 AL136038.4-201ENST00000603606 1261 ntBASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRD3OSQ6XYD6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 AC006333.2-201ENST00000607957 2099 ntBASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 KRT18P48-201ENST00000434763 852 ntBASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 AC010240.3-201ENST00000607688 395 ntBASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 AC034236.2-201ENST00000606662 1610 ntBASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 AL049812.1-201ENST00000432563 2267 ntBASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.09■□□□□ 0.01
BRD3OSQ6XYD6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
BRD3OSQ6XYD6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.08■□□□□ 0
BRD3OSQ6XYD6 AC104390.1-201ENST00000555663 520 ntBASIC15.08■□□□□ 0
BRD3OSQ6XYD6 AC011498.5-201ENST00000592027 486 ntBASIC15.08■□□□□ 0
BRD3OSQ6XYD6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms