Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 AL445675.2-201ENST00000620291 557 ntBASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 AP006294.2-201ENST00000641667 209 ntBASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 NIFKP9-201ENST00000419265 221 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AC012618.2-201ENST00000428058 849 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 KSR1P1-201ENST00000446298 240 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AP002982.1-201ENST00000492365 877 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AF186192.3-201ENST00000583427 947 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AP001412.1-201ENST00000608405 714 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 HLA-A-209ENST00000638375 975 ntBASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATPAF1Q5TC12 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.18■□□□□ 0.18
ATPAF1Q5TC12 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms