Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 FAM192A-202ENST00000389447 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.733e-6■□□□□ 9.4
LSM11P83369 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC10.45□□□□□ -0.743e-6■□□□□ 9.4
LSM11P83369 FAM192A-220ENST00000569266 981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.743e-6■□□□□ 9.4
LSM11P83369 MAST2-203ENST00000372009 4047 ntTSL 5 BASIC10.39□□□□□ -0.753e-6■□□□□ 9.4
LSM11P83369 GSTA4-205ENST00000477599 1127 ntTSL 39.8□□□□□ -0.843e-6■□□□□ 9.4
LSM11P83369 FAM192A-211ENST00000565956 618 ntTSL 39.59□□□□□ -0.873e-6■□□□□ 9.4
LSM11P83369 GMPR2-213ENST00000558788 517 ntTSL 59.22□□□□□ -0.933e-6■□□□□ 9.4
LSM11P83369 GMPR2-220ENST00000559479 573 ntTSL 38.87□□□□□ -0.993e-6■□□□□ 9.4
LSM11P83369 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.033e-6■□□□□ 9.4
LSM11P83369 GMPR2-225ENST00000559943 360 ntTSL 37.78□□□□□ -1.163e-6■□□□□ 9.4
LSM11P83369 GSTA4-206ENST00000486559 1698 ntTSL 26.8□□□□□ -1.323e-6■□□□□ 9.4
LSM11P83369 GMPR2-215ENST00000558932 231 ntTSL 35.65□□□□□ -1.53e-6■□□□□ 9.4
LSM11P83369 USP7-210ENST00000565455 3554 ntTSL 25.1□□□□□ -1.593e-6■□□□□ 9.4
LSM11P83369 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.49■□□□□ 0.233e-6■□□□□ 9.4
LSM11P83369 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.13e-6■□□□□ 9.4
LSM11P83369 RREB1-206ENST00000471433 1021 ntTSL 512.09□□□□□ -0.473e-6■□□□□ 9.4
LSM11P83369 RREB1-209ENST00000491191 998 ntTSL 512.09□□□□□ -0.473e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-214ENST00000520485 1548 ntTSL 220.78■□□□□ 0.927e-7■□□□□ 9.3
LSM11P83369 ARFGAP1-207ENST00000518618 1244 ntTSL 215.5■□□□□ 0.071e-17■□□□□ 9.3
LSM11P83369 SLC26A6-215ENST00000466257 706 ntTSL 37.6□□□□□ -1.191e-11■□□□□ 9.3
LSM11P83369 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.97■■□□□ 1.273e-7■□□□□ 9.3
LSM11P83369 FAM157C-203ENST00000568070 480 ntTSL 311.13□□□□□ -0.637e-9■□□□□ 9.3
LSM11P83369 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC9.92□□□□□ -0.827e-9■□□□□ 9.3
LSM11P83369 DDX42-210ENST00000579539 571 ntTSL 29.76□□□□□ -0.853e-7■□□□□ 9.3
LSM11P83369 RAB17-205ENST00000411462 663 ntTSL 213.12□□□□□ -0.312e-10■□□□□ 9.3
LSM11P83369 MAPK8IP3-209ENST00000566064 511 ntTSL 216.14■□□□□ 0.171e-8■□□□□ 9.3
LSM11P83369 ANKZF1-209ENST00000460966 873 ntTSL 1 (best)8.8□□□□□ -15e-8■□□□□ 9.3
LSM11P83369 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.735e-29■□□□□ 9.3
LSM11P83369 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.1□□□□□ -0.151e-10■□□□□ 9.3
LSM11P83369 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.348e-7■□□□□ 9.3
LSM11P83369 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.125e-8■□□□□ 9.3
LSM11P83369 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.69■□□□□ 0.18e-7■□□□□ 9.3
LSM11P83369 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.8□□□□□ -0.045e-8■□□□□ 9.3
LSM11P83369 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.68□□□□□ -0.065e-8■□□□□ 9.3
LSM11P83369 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.085e-8■□□□□ 9.3
LSM11P83369 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.12□□□□□ -0.155e-8■□□□□ 9.3
LSM11P83369 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.08□□□□□ -0.165e-8■□□□□ 9.3
LSM11P83369 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.89□□□□□ -0.195e-8■□□□□ 9.3
LSM11P83369 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.89□□□□□ -0.195e-8■□□□□ 9.3
LSM11P83369 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.19□□□□□ -0.35e-8■□□□□ 9.3
LSM11P83369 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.17□□□□□ -0.35e-8■□□□□ 9.3
LSM11P83369 TMEM94-205ENST00000577247 922 ntTSL 512.72□□□□□ -0.375e-11■□□□□ 9.3
LSM11P83369 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.578e-7■□□□□ 9.3
LSM11P83369 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.638e-7■□□□□ 9.3
LSM11P83369 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.648e-7■□□□□ 9.3
LSM11P83369 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC10.12□□□□□ -0.798e-7■□□□□ 9.3
LSM11P83369 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.98e-7■□□□□ 9.3
LSM11P83369 CEP250-214ENST00000621352 607 ntTSL 38.89□□□□□ -0.998e-7■□□□□ 9.3
LSM11P83369 AP1G2-215ENST00000554977 569 ntTSL 48.45□□□□□ -1.065e-12■□□□□ 9.3
LSM11P83369 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.87■□□□□ 0.139e-10■□□□□ 9.3
LSM11P83369 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.79□□□□□ -0.049e-10■□□□□ 9.3
LSM11P83369 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.229e-10■□□□□ 9.3
LSM11P83369 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.519e-10■□□□□ 9.3
LSM11P83369 RAB17-209ENST00000466244 937 ntTSL 213.27□□□□□ -0.291e-10■□□□□ 9.3
LSM11P83369 SEMA3B-208ENST00000456210 2065 ntTSL 217.77■□□□□ 0.446e-9■□□□□ 9.3
LSM11P83369 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.366e-9■□□□□ 9.3
LSM11P83369 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.246e-9■□□□□ 9.3
LSM11P83369 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.146e-9■□□□□ 9.3
LSM11P83369 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)15.56■□□□□ 0.086e-9■□□□□ 9.3
LSM11P83369 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.076e-9■□□□□ 9.3
LSM11P83369 SEMA3B-214ENST00000619119 3158 ntTSL 514.61□□□□□ -0.076e-9■□□□□ 9.3
LSM11P83369 SEMA3B-203ENST00000419007 3283 ntTSL 214.41□□□□□ -0.16e-9■□□□□ 9.3
LSM11P83369 NSUN5P2-203ENST00000457352 1529 ntBASIC15.63■□□□□ 0.099e-8■□□□□ 9.3
LSM11P83369 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.051e-7■□□□□ 9.3
LSM11P83369 BMP2K-202ENST00000389010 2741 ntTSL 1 (best)19.3■□□□□ 0.681e-7■□□□□ 9.3
LSM11P83369 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.471e-7■□□□□ 9.3
LSM11P83369 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.411e-7■□□□□ 9.3
LSM11P83369 PNPLA2-202ENST00000525250 2726 ntTSL 216.89■□□□□ 0.291e-7■□□□□ 9.3
LSM11P83369 PNPLA2-204ENST00000529255 1301 ntTSL 1 (best)15.55■□□□□ 0.081e-7■□□□□ 9.3
LSM11P83369 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.78□□□□□ -1.321e-7■□□□□ 9.3
LSM11P83369 SIRT7-210ENST00000572902 909 ntTSL 319.1■□□□□ 0.652e-7■□□□□ 9.3
LSM11P83369 INF2-208ENST00000481338 1102 ntTSL 215.42■□□□□ 0.062e-13■□□□□ 9.2
LSM11P83369 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.62□□□□□ -0.232e-13■□□□□ 9.2
LSM11P83369 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.248e-9■□□□□ 9.2
LSM11P83369 INF2-201ENST00000252527 3050 ntTSL 213.43□□□□□ -0.262e-13■□□□□ 9.2
LSM11P83369 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.288e-9■□□□□ 9.2
LSM11P83369 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.292e-13■□□□□ 9.2
LSM11P83369 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.62e-13■□□□□ 9.2
LSM11P83369 KDM3A-205ENST00000441719 8741 ntTSL 29.43□□□□□ -0.98e-9■□□□□ 9.2
LSM11P83369 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.988e-9■□□□□ 9.2
LSM11P83369 KDM3A-210ENST00000470160 2955 ntTSL 26.44□□□□□ -1.388e-9■□□□□ 9.2
LSM11P83369 KDM3A-214ENST00000491383 4485 ntTSL 1 (best)4.65□□□□□ -1.678e-9■□□□□ 9.2
LSM11P83369 PACSIN3-209ENST00000532457 1845 ntTSL 520.14■□□□□ 0.812e-6■□□□□ 9.2
LSM11P83369 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.612e-6■□□□□ 9.2
LSM11P83369 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.62e-6■□□□□ 9.2
LSM11P83369 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.413e-6■□□□□ 9.2
LSM11P83369 RBM39-244ENST00000615771 686 ntTSL 512.84□□□□□ -0.353e-17■□□□□ 9.2
LSM11P83369 RBM39-229ENST00000475651 555 ntTSL 59.28□□□□□ -0.923e-17■□□□□ 9.2
LSM11P83369 SLC5A9-207ENST00000525901 489 ntTSL 314.65□□□□□ -0.069e-9■□□□□ 9.2
LSM11P83369 TBCD-209ENST00000572794 1380 ntTSL 218.04■□□□□ 0.487e-8■□□□□ 9.2
LSM11P83369 TBCD-208ENST00000572389 776 ntTSL 215.01□□□□□ -0.017e-8■□□□□ 9.2
LSM11P83369 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.32□□□□□ -0.127e-8■□□□□ 9.2
LSM11P83369 PSME2-208ENST00000559359 484 ntTSL 214.07□□□□□ -0.169e-8■□□□□ 9.2
LSM11P83369 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.347e-8■□□□□ 9.2
LSM11P83369 WDR59-209ENST00000563381 583 ntTSL 311.33□□□□□ -0.67e-8■□□□□ 9.2
LSM11P83369 AMPD2-211ENST00000479919 690 ntTSL 39.9□□□□□ -0.827e-8■□□□□ 9.2
LSM11P83369 WDR59-222ENST00000570070 565 ntTSL 49.33□□□□□ -0.927e-8■□□□□ 9.2
LSM11P83369 WDR59-217ENST00000569229 901 ntTSL 59.09□□□□□ -0.957e-8■□□□□ 9.2
LSM11P83369 WDR59-212ENST00000566924 569 ntTSL 49.07□□□□□ -0.967e-8■□□□□ 9.2
LSM11P83369 WDR59-210ENST00000563797 652 ntTSL 38.56□□□□□ -1.047e-8■□□□□ 9.2
Retrieved 100 of 11,495 protein–RNA pairs in 337.7 ms