RNA–Protein interactions for RNA: ENST00000565455.5

USP7-210, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 2

Gene USP7, Length 3,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-210ENST00000565455 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
USP7-210ENST00000565455 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
USP7-210ENST00000565455 ZCCHC6Q5VYS8 1495 aaKnown RBP9.8□□□□□ -0.84
USP7-210ENST00000565455 DCAF1Q9Y4B6 1507 aa9.64□□□□□ -0.87
USP7-210ENST00000565455 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
USP7-210ENST00000565455 ABCC9O60706 1549 aa9.49□□□□□ -0.89
USP7-210ENST00000565455 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
USP7-210ENST00000565455 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
USP7-210ENST00000565455 NACADO15069 1562 aa9.35□□□□□ -0.91
USP7-210ENST00000565455 SCRIBQ14160 1630 aa9.33□□□□□ -0.92
USP7-210ENST00000565455 RB1CC1Q8TDY2 1594 aa9.24□□□□□ -0.93
USP7-210ENST00000565455 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
USP7-210ENST00000565455 HRCP23327 699 aa9.24□□□□□ -0.93
USP7-210ENST00000565455 UNC13AQ9UPW8 1703 aa9.21□□□□□ -0.94
USP7-210ENST00000565455 SUPT5HO00267 1087 aaKnown RBP9.16□□□□□ -0.94
USP7-210ENST00000565455 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
USP7-210ENST00000565455 CECR2Q9BXF3 1484 aa9.09□□□□□ -0.96
USP7-210ENST00000565455 RSF1Q96T23 1441 aaPredicted RBP9.06□□□□□ -0.96
USP7-210ENST00000565455 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
USP7-210ENST00000565455 MROH2BQ7Z745 1585 aa9.03□□□□□ -0.96
USP7-210ENST00000565455 WIZO95785 1651 aa8.97□□□□□ -0.97
USP7-210ENST00000565455 PABPN1Q86U42 306 aaKnown RBP eCLIP8.96□□□□□ -0.972e-6■■□□□ 12.3
USP7-210ENST00000565455 BAZ1AQ9NRL2 1556 aaPredicted RBP8.94□□□□□ -0.98
USP7-210ENST00000565455 SMARCA4P51532 1647 aa8.93□□□□□ -0.98
USP7-210ENST00000565455 TRIM26Q12899 539 aaPredicted RBP8.9□□□□□ -0.98
USP7-210ENST00000565455 PCGF6Q9BYE7 350 aa8.88□□□□□ -0.99
USP7-210ENST00000565455 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
USP7-210ENST00000565455 ZEB1P37275 1124 aaPredicted RBP8.83□□□□□ -1
USP7-210ENST00000565455 TOP2AP11388 1531 aaKnown RBP8.82□□□□□ -1
USP7-210ENST00000565455 WRNQ14191 1432 aaPredicted RBP eCLIP8.78□□□□□ -1
USP7-210ENST00000565455 SMARCA2P51531 1590 aa8.78□□□□□ -1
USP7-210ENST00000565455 LOC105371045A0A1W2PR82 267 aa8.77□□□□□ -1
USP7-210ENST00000565455 PPARGC1BQ86YN6 1023 aaKnown RBP8.76□□□□□ -1.01
USP7-210ENST00000565455 ATAD2BQ9ULI0 1458 aa8.76□□□□□ -1.01
USP7-210ENST00000565455 CCDC88BA6NC98 1476 aa8.75□□□□□ -1.01
USP7-210ENST00000565455 PELP1Q8IZL8 1130 aaKnown RBP8.7□□□□□ -1.02
USP7-210ENST00000565455 BAZ1BQ9UIG0 1483 aaKnown RBP8.67□□□□□ -1.02
USP7-210ENST00000565455 EEA1Q15075 1411 aa8.65□□□□□ -1.02
USP7-210ENST00000565455 NCAPD3P42695 1498 aa8.65□□□□□ -1.02
USP7-210ENST00000565455 HMGXB3Q12766 1538 aa8.65□□□□□ -1.02
USP7-210ENST00000565455 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
USP7-210ENST00000565455 ABCC8Q09428 1581 aa8.62□□□□□ -1.03
USP7-210ENST00000565455 KIF21BO75037 1637 aa8.62□□□□□ -1.03
USP7-210ENST00000565455 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
USP7-210ENST00000565455 TNIKQ9UKE5 1360 aa8.58□□□□□ -1.04
USP7-210ENST00000565455 SCAF1Q9H7N4 1312 aaKnown RBP8.53□□□□□ -1.04
USP7-210ENST00000565455 CEP162Q5TB80 1403 aa8.52□□□□□ -1.05
USP7-210ENST00000565455 SYNJ1O43426 1573 aa8.52□□□□□ -1.05
USP7-210ENST00000565455 BIVM-ERCC5R4GMW8 1640 aa8.5□□□□□ -1.05
USP7-210ENST00000565455 CFTRP13569 1480 aa8.5□□□□□ -1.05
USP7-210ENST00000565455 GOLGA3Q08378 1498 aa8.49□□□□□ -1.05
USP7-210ENST00000565455 DNAJC5BQ9UF47 199 aa8.48□□□□□ -1.05
USP7-210ENST00000565455 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
USP7-210ENST00000565455 SOGA1O94964 1423 aa8.46□□□□□ -1.06
USP7-210ENST00000565455 RUSC2Q8N2Y8 1516 aa8.46□□□□□ -1.06
USP7-210ENST00000565455 TOP2BQ02880 1626 aa8.45□□□□□ -1.06
USP7-210ENST00000565455 FAM9AQ8IZU1 332 aaPredicted RBP8.45□□□□□ -1.06
USP7-210ENST00000565455 ERICH3Q5RHP9 1530 aa8.45□□□□□ -1.06
USP7-210ENST00000565455 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
USP7-210ENST00000565455 CUX1P39880 1505 aa8.43□□□□□ -1.06
USP7-210ENST00000565455 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
USP7-210ENST00000565455 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
USP7-210ENST00000565455 CUX2O14529 1486 aa8.41□□□□□ -1.06
USP7-210ENST00000565455 NESP48681 1621 aa8.41□□□□□ -1.06
USP7-210ENST00000565455 MYT1Q01538 1121 aa8.4□□□□□ -1.07
USP7-210ENST00000565455 VPS8Q8N3P4 1428 aa8.39□□□□□ -1.07
USP7-210ENST00000565455 CLSPNQ9HAW4 1339 aa8.36□□□□□ -1.07
USP7-210ENST00000565455 EHMT2Q96KQ7 1210 aa8.36□□□□□ -1.07
USP7-210ENST00000565455 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
USP7-210ENST00000565455 PRXQ9BXM0 1461 aa8.34□□□□□ -1.07
USP7-210ENST00000565455 FANCD2Q9BXW9 1451 aa8.34□□□□□ -1.07
USP7-210ENST00000565455 CLIP1P30622 1438 aa8.34□□□□□ -1.07
USP7-210ENST00000565455 LAMC3Q9Y6N6 1575 aa8.33□□□□□ -1.08
USP7-210ENST00000565455 MAP3K1Q13233 1512 aa8.33□□□□□ -1.08
USP7-210ENST00000565455 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
USP7-210ENST00000565455 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
USP7-210ENST00000565455 KIF21AQ7Z4S6 1674 aa8.3□□□□□ -1.08
USP7-210ENST00000565455 RRBP1Q9P2E9 1410 aaKnown RBP8.3□□□□□ -1.08
USP7-210ENST00000565455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.3□□□□□ -1.08
USP7-210ENST00000565455 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
USP7-210ENST00000565455 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
USP7-210ENST00000565455 ARAP1Q96P48 1450 aa8.29□□□□□ -1.08
USP7-210ENST00000565455 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
USP7-210ENST00000565455 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
USP7-210ENST00000565455 RAPGEF2Q9Y4G8 1499 aa8.28□□□□□ -1.08
USP7-210ENST00000565455 DNMBPQ6XZF7 1577 aa8.28□□□□□ -1.08
USP7-210ENST00000565455 CENPBP07199 599 aaPredicted RBP8.28□□□□□ -1.08
USP7-210ENST00000565455 TOPBP1Q92547 1522 aa8.28□□□□□ -1.08
USP7-210ENST00000565455 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
USP7-210ENST00000565455 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
USP7-210ENST00000565455 WDR97A6NE52 1622 aa8.24□□□□□ -1.09
USP7-210ENST00000565455 RAD54L2Q9Y4B4 1467 aa8.24□□□□□ -1.09
USP7-210ENST00000565455 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
USP7-210ENST00000565455 PDS5BQ9NTI5 1447 aa8.21□□□□□ -1.09
USP7-210ENST00000565455 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.09
USP7-210ENST00000565455 DHX57Q6P158 1386 aaKnown RBP8.21□□□□□ -1.1
USP7-210ENST00000565455 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
USP7-210ENST00000565455 IGF1RP08069 1367 aa8.2□□□□□ -1.1
USP7-210ENST00000565455 TARBP1Q13395 1621 aaKnown RBP8.19□□□□□ -1.1
USP7-210ENST00000565455 ABCA5Q8WWZ7 1642 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms