Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 HMGA1P5-201ENST00000412453 271 ntBASIC19.69■□□□□ 0.74
SNX16P57768 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX16P57768 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX16P57768 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX16P57768 WWOX-216ENST00000569818 525 ntBASIC19.69■□□□□ 0.74
SNX16P57768 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX16P57768 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX16P57768 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX16P57768 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.69■□□□□ 0.74
SNX16P57768 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SNX16P57768 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX16P57768 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX16P57768 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX16P57768 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNX16P57768 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SNX16P57768 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SNX16P57768 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.68■□□□□ 0.74
SNX16P57768 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SNX16P57768 AC087499.1-201ENST00000418141 1075 ntBASIC19.68■□□□□ 0.74
SNX16P57768 KRT18P41-201ENST00000518924 1277 ntBASIC19.68■□□□□ 0.74
SNX16P57768 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX16P57768 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX16P57768 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX16P57768 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.68■□□□□ 0.74
SNX16P57768 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX16P57768 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX16P57768 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX16P57768 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX16P57768 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX16P57768 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SNX16P57768 AC145285.6-201ENST00000604632 637 ntBASIC19.67■□□□□ 0.74
SNX16P57768 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX16P57768 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX16P57768 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX16P57768 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX16P57768 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX16P57768 KRT8P45-201ENST00000414328 1447 ntBASIC19.67■□□□□ 0.74
SNX16P57768 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 AC004408.2-201ENST00000623613 2777 ntBASIC19.66■□□□□ 0.74
SNX16P57768 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNX16P57768 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX16P57768 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX16P57768 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX16P57768 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SNX16P57768 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX16P57768 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX16P57768 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX16P57768 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNX16P57768 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX16P57768 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SNX16P57768 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX16P57768 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX16P57768 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX16P57768 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SNX16P57768 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms