Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.92■□□□□ 0.3
GDF1P27539 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF1P27539 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GDF1P27539 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 HEIH-201ENST00000623091 1652 ntBASIC16.91■□□□□ 0.3
GDF1P27539 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.91■□□□□ 0.3
GDF1P27539 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
GDF1P27539 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 RASA4DP-201ENST00000460726 1199 ntBASIC16.91■□□□□ 0.3
GDF1P27539 SEC1P-202ENST00000473944 940 ntBASIC16.91■□□□□ 0.3
GDF1P27539 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.91■□□□□ 0.3
GDF1P27539 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
GDF1P27539 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.91■□□□□ 0.3
GDF1P27539 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.91■□□□□ 0.3
GDF1P27539 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.91■□□□□ 0.3
GDF1P27539 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDF1P27539 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GDF1P27539 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.91■□□□□ 0.3
GDF1P27539 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 KRT8P7-201ENST00000533003 1432 ntBASIC16.9■□□□□ 0.3
GDF1P27539 LINC01311-201ENST00000565162 1445 ntBASIC16.9■□□□□ 0.3
GDF1P27539 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.9■□□□□ 0.3
GDF1P27539 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.9■□□□□ 0.3
GDF1P27539 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.9■□□□□ 0.3
GDF1P27539 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.9■□□□□ 0.3
GDF1P27539 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.9■□□□□ 0.3
GDF1P27539 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.9■□□□□ 0.3
GDF1P27539 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.9■□□□□ 0.3
GDF1P27539 AL121956.5-201ENST00000625261 221 ntBASIC16.9■□□□□ 0.3
GDF1P27539 AL358472.4-201ENST00000633140 710 ntBASIC16.9■□□□□ 0.3
GDF1P27539 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GDF1P27539 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GDF1P27539 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDF1P27539 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GDF1P27539 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.89■□□□□ 0.3
GDF1P27539 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.89■□□□□ 0.3
GDF1P27539 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
GDF1P27539 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GDF1P27539 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GDF1P27539 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.89■□□□□ 0.29
GDF1P27539 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GDF1P27539 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.89■□□□□ 0.29
GDF1P27539 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.89■□□□□ 0.29
GDF1P27539 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.89■□□□□ 0.29
GDF1P27539 AC091076.1-201ENST00000610741 619 ntBASIC16.89■□□□□ 0.29
GDF1P27539 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.89■□□□□ 0.29
GDF1P27539 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms