Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.44■□□□□ 0.86
COL1A2P08123 AC005332.3-201ENST00000589904 676 ntBASIC20.44■□□□□ 0.86
COL1A2P08123 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A2P08123 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COL1A2P08123 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL1A2P08123 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COL1A2P08123 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL1A2P08123 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 IGHGP-201ENST00000390555 1178 ntBASIC20.43■□□□□ 0.86
COL1A2P08123 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
COL1A2P08123 AL450487.1-201ENST00000426799 995 ntBASIC20.43■□□□□ 0.86
COL1A2P08123 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.43■□□□□ 0.86
COL1A2P08123 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.43■□□□□ 0.86
COL1A2P08123 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A2P08123 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
COL1A2P08123 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.42■□□□□ 0.86
COL1A2P08123 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL1A2P08123 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 MIR149-201ENST00000384879 89 ntBASIC20.42■□□□□ 0.86
COL1A2P08123 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 DRAXINP1-201ENST00000437611 948 ntBASIC20.42■□□□□ 0.86
COL1A2P08123 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.42■□□□□ 0.86
COL1A2P08123 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
COL1A2P08123 MIR3652-201ENST00000579335 131 ntBASIC20.42■□□□□ 0.86
COL1A2P08123 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.42■□□□□ 0.86
COL1A2P08123 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.42■□□□□ 0.86
COL1A2P08123 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL1A2P08123 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL1A2P08123 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 AC116562.4-201ENST00000641316 2276 ntBASIC20.41■□□□□ 0.86
COL1A2P08123 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.41■□□□□ 0.86
COL1A2P08123 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.41■□□□□ 0.86
COL1A2P08123 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.41■□□□□ 0.86
COL1A2P08123 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.41■□□□□ 0.86
COL1A2P08123 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.41■□□□□ 0.86
COL1A2P08123 TPSP2-201ENST00000561760 610 ntBASIC20.41■□□□□ 0.86
COL1A2P08123 AC090616.6-201ENST00000582640 721 ntBASIC20.41■□□□□ 0.86
COL1A2P08123 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.41■□□□□ 0.86
COL1A2P08123 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COL1A2P08123 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.41■□□□□ 0.86
COL1A2P08123 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.41■□□□□ 0.86
COL1A2P08123 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COL1A2P08123 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 KRT18P1-202ENST00000452408 1331 ntBASIC20.41■□□□□ 0.86
COL1A2P08123 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL1A2P08123 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms