Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VEGFDO43915 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VEGFDO43915 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.3■□□□□ 0.52
VEGFDO43915 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VEGFDO43915 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.3■□□□□ 0.52
VEGFDO43915 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.3■□□□□ 0.52
VEGFDO43915 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
VEGFDO43915 MIR3917-201ENST00000580971 93 ntBASIC18.3■□□□□ 0.52
VEGFDO43915 AC010240.3-201ENST00000607688 395 ntBASIC18.3■□□□□ 0.52
VEGFDO43915 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.3■□□□□ 0.52
VEGFDO43915 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.3■□□□□ 0.52
VEGFDO43915 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VEGFDO43915 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VEGFDO43915 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VEGFDO43915 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VEGFDO43915 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.29■□□□□ 0.52
VEGFDO43915 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 RASA4DP-201ENST00000460726 1199 ntBASIC18.29■□□□□ 0.52
VEGFDO43915 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.29■□□□□ 0.52
VEGFDO43915 NTF6B-201ENST00000591913 560 ntBASIC18.29■□□□□ 0.52
VEGFDO43915 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.29■□□□□ 0.52
VEGFDO43915 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VEGFDO43915 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 KRT8P50-201ENST00000562022 1438 ntBASIC18.29■□□□□ 0.52
VEGFDO43915 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
VEGFDO43915 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
VEGFDO43915 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VEGFDO43915 AC120498.9-201ENST00000339021 3867 ntBASIC18.28■□□□□ 0.52
VEGFDO43915 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.28■□□□□ 0.52
VEGFDO43915 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.28■□□□□ 0.52
VEGFDO43915 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 AL359075.1-203ENST00000462729 1002 ntBASIC18.28■□□□□ 0.52
VEGFDO43915 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 AP000974.1-201ENST00000623909 2387 ntBASIC18.28■□□□□ 0.52
VEGFDO43915 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.28■□□□□ 0.52
VEGFDO43915 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VEGFDO43915 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VEGFDO43915 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VEGFDO43915 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VEGFDO43915 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VEGFDO43915 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VEGFDO43915 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
VEGFDO43915 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
VEGFDO43915 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VEGFDO43915 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.27■□□□□ 0.52
VEGFDO43915 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
VEGFDO43915 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.27■□□□□ 0.52
VEGFDO43915 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.27■□□□□ 0.52
VEGFDO43915 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VEGFDO43915 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.27■□□□□ 0.52
VEGFDO43915 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VEGFDO43915 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.27■□□□□ 0.52
VEGFDO43915 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
VEGFDO43915 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
VEGFDO43915 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VEGFDO43915 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.27■□□□□ 0.52
VEGFDO43915 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VEGFDO43915 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VEGFDO43915 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.27■□□□□ 0.51
VEGFDO43915 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
VEGFDO43915 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.27■□□□□ 0.51
VEGFDO43915 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
VEGFDO43915 AL031598.1-201ENST00000561511 1773 ntBASIC18.27■□□□□ 0.51
VEGFDO43915 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VEGFDO43915 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VEGFDO43915 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VEGFDO43915 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VEGFDO43915 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VEGFDO43915 ANO7L1-203ENST00000602586 1720 ntBASIC18.26■□□□□ 0.51
VEGFDO43915 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VEGFDO43915 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VEGFDO43915 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms