Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NPIPB4C9JG80 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.51■□□□□ 0.23
NPIPB4C9JG80 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 MIR1238-201ENST00000408483 83 ntBASIC16.51■□□□□ 0.23
NPIPB4C9JG80 AC007663.1-201ENST00000438948 1240 ntBASIC16.51■□□□□ 0.23
NPIPB4C9JG80 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 MIR3180-4-201ENST00000582223 153 ntBASIC16.51■□□□□ 0.23
NPIPB4C9JG80 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 CR769767.2-201ENST00000622735 460 ntBASIC16.51■□□□□ 0.23
NPIPB4C9JG80 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB4C9JG80 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 AC009065.1-201ENST00000564055 1225 ntBASIC16.5■□□□□ 0.23
NPIPB4C9JG80 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB4C9JG80 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 AL390955.1-201ENST00000428694 934 ntBASIC16.49■□□□□ 0.23
NPIPB4C9JG80 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB4C9JG80 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 AC128688.1-201ENST00000487626 519 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms