Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.35■□□□□ 0.37
CCDC160A6NGH7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 KRT16P2-201ENST00000414673 1423 ntBASIC17.35■□□□□ 0.37
CCDC160A6NGH7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC160A6NGH7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 AL596257.1-201ENST00000641463 2694 ntBASIC17.34■□□□□ 0.37
CCDC160A6NGH7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC160A6NGH7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC160A6NGH7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CCDC160A6NGH7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC160A6NGH7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms