Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 AD000864.1-201ENST00000624076 2295 ntBASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 KRT8P41-201ENST00000533985 1514 ntBASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 AL121829.2-201ENST00000620908 328 ntBASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 HLA-A-209ENST00000638375 975 ntBASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV3S1A0A5B6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV3S1A0A5B6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
TCRBV3S1A0A5B6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TCRBV3S1A0A5B6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 BX276092.2-201ENST00000417668 665 ntBASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV3S1A0A5B6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms