Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 FEM1AP3-201ENST00000403722 1741 ntBASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 AC009053.2-201ENST00000563701 2365 ntBASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHGB4Q9UN71 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 NBPF21P-201ENST00000425093 1451 ntBASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 AL355802.2-201ENST00000402069 882 ntBASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 UNC93B5-201ENST00000530315 699 ntBASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGB4Q9UN71 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB4Q9UN71 KRT17P3-201ENST00000420566 1262 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms