Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AC068880.1-201ENST00000507289 2297 ntBASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AC018470.1-201ENST00000624790 3129 ntBASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AL133373.2-201ENST00000623187 2828 ntBASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AC126763.1-201ENST00000552015 2118 ntBASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AC010331.1-201ENST00000611423 582 ntBASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP3Q9BZS1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 HTR7P1-201ENST00000538670 1336 ntBASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 MYC-208ENST00000641036 567 ntBASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 AC020916.1-201ENST00000587762 1774 ntBASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 NBPF21P-201ENST00000425093 1451 ntBASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXP3Q9BZS1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 PCDHB18P-201ENST00000524813 2368 ntBASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AC005332.8-201ENST00000622750 2735 ntBASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms