Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 B3GAT3P1-201ENST00000471720 806 ntBASIC17.33■□□□□ 0.36
TM9SF2Q99805 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 NAPSB-206ENST00000562112 1266 ntBASIC17.33■□□□□ 0.36
TM9SF2Q99805 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 HLA-A-209ENST00000638375 975 ntBASIC17.33■□□□□ 0.36
TM9SF2Q99805 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.33■□□□□ 0.36
TM9SF2Q99805 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF2Q99805 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 AC145285.6-201ENST00000604632 637 ntBASIC17.32■□□□□ 0.36
TM9SF2Q99805 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TM9SF2Q99805 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF2Q99805 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF2Q99805 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM9SF2Q99805 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 MESTP1-201ENST00000404287 994 ntBASIC17.3■□□□□ 0.36
TM9SF2Q99805 AC004951.3-201ENST00000418645 1148 ntBASIC17.3■□□□□ 0.36
TM9SF2Q99805 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 C2orf69P3-201ENST00000565542 1120 ntBASIC17.3■□□□□ 0.36
TM9SF2Q99805 AP005242.2-201ENST00000580065 1175 ntBASIC17.3■□□□□ 0.36
TM9SF2Q99805 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TM9SF2Q99805 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF2Q99805 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms