Protein–RNA interactions for Protein: Q96ES6

MFSD3, Major facilitator superfamily domain-containing protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD3Q96ES6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 Z99916.2-201ENST00000604037 246 ntBASIC18.8■□□□□ 0.6
MFSD3Q96ES6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MFSD3Q96ES6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 AC008556.1-201ENST00000610908 2040 ntBASIC18.79■□□□□ 0.6
MFSD3Q96ES6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.79■□□□□ 0.6
MFSD3Q96ES6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 SLC25A1P4-201ENST00000567977 778 ntBASIC18.79■□□□□ 0.6
MFSD3Q96ES6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 DGCR10-201ENST00000609839 495 ntBASIC18.79■□□□□ 0.6
MFSD3Q96ES6 REXO1L10P-201ENST00000615707 1290 ntBASIC18.79■□□□□ 0.6
MFSD3Q96ES6 REXO1L12P-201ENST00000622156 912 ntBASIC18.79■□□□□ 0.6
MFSD3Q96ES6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MFSD3Q96ES6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 AP001412.1-201ENST00000608405 714 ntBASIC18.78■□□□□ 0.6
MFSD3Q96ES6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MFSD3Q96ES6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 AC097488.1-201ENST00000507834 756 ntBASIC18.77■□□□□ 0.6
MFSD3Q96ES6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MFSD3Q96ES6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms