Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 AC073111.5-205ENST00000641717 521 ntBASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 HEIH-201ENST00000623091 1652 ntBASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 CDCA4P2-201ENST00000441182 718 ntBASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 AC006557.6-201ENST00000623071 864 ntBASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB3IL1Q8TBN0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IL1Q8TBN0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 OR6D1P-203ENST00000641209 4860 ntBASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 BX276092.2-201ENST00000417668 665 ntBASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3IL1Q8TBN0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms