Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 AL031598.1-201ENST00000561511 1773 ntBASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ARHGEF39Q8N4T4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 RASA4DP-201ENST00000460726 1199 ntBASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 AL359075.1-203ENST00000462729 1002 ntBASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 MIR3917-201ENST00000580971 93 ntBASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 AP000974.1-201ENST00000623909 2387 ntBASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.62■□□□□ 0.41
ARHGEF39Q8N4T4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 AL031133.1-201ENST00000406807 723 ntBASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 MIR3180-4-201ENST00000582223 153 ntBASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 AC010240.3-201ENST00000607688 395 ntBASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARHGEF39Q8N4T4 AC018445.3-201ENST00000624177 1945 ntBASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 AC092647.4-201ENST00000457211 535 ntBASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 LINC01238-205ENST00000567549 1107 ntBASIC17.6■□□□□ 0.41
ARHGEF39Q8N4T4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms