Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 GPALPP1-207ENST00000611650 899 ntBASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 AL512353.2-201ENST00000448759 1962 ntBASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEFF1Q8IYR6 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 AP002469.2-201ENST00000531724 424 ntBASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 AC023511.2-201ENST00000618803 211 ntBASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TMEFF1Q8IYR6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 KRT8P7-201ENST00000533003 1432 ntBASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 AC099336.1-202ENST00000602961 463 ntBASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEFF1Q8IYR6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 AL158211.5-201ENST00000623583 2518 ntBASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 HOXB1-202ENST00000577092 1414 ntBASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms