Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 AL162741.1-201ENST00000565563 1558 ntBASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCHD4Q6ZW05 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
PTCHD4Q6ZW05 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTCHD4Q6ZW05 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCHD4Q6ZW05 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 AL355802.2-201ENST00000402069 882 ntBASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 POM121L13P-201ENST00000422362 380 ntBASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 UNC93B5-201ENST00000530315 699 ntBASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PTCHD4Q6ZW05 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 HLA-L-209ENST00000420110 1011 ntBASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms