Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 REXO1L12P-201ENST00000622156 912 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 AC005332.8-201ENST00000622750 2735 ntBASIC21.09■□□□□ 0.97
SHC4Q6S5L8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 AC012618.2-201ENST00000428058 849 ntBASIC21.09■□□□□ 0.97
SHC4Q6S5L8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 SLC25A1P4-201ENST00000567977 778 ntBASIC21.09■□□□□ 0.97
SHC4Q6S5L8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 AL049637.2-201ENST00000641778 930 ntBASIC21.09■□□□□ 0.97
SHC4Q6S5L8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC4Q6S5L8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 NOC2LP2-201ENST00000407594 1944 ntBASIC21.08■□□□□ 0.97
SHC4Q6S5L8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 KRT18P41-201ENST00000518924 1277 ntBASIC21.08■□□□□ 0.97
SHC4Q6S5L8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.08■□□□□ 0.97
SHC4Q6S5L8 MYC-208ENST00000641036 567 ntBASIC21.08■□□□□ 0.97
SHC4Q6S5L8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC4Q6S5L8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC4Q6S5L8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC4Q6S5L8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SHC4Q6S5L8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC4Q6S5L8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 Z99916.2-201ENST00000604037 246 ntBASIC21.07■□□□□ 0.96
SHC4Q6S5L8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SHC4Q6S5L8 MYLKP1-201ENST00000509077 1580 ntBASIC21.06■□□□□ 0.96
SHC4Q6S5L8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 AC026471.1-201ENST00000564629 3026 ntBASIC21.06■□□□□ 0.96
SHC4Q6S5L8 AC068880.1-201ENST00000507289 2297 ntBASIC21.06■□□□□ 0.96
SHC4Q6S5L8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 AC097488.1-201ENST00000507834 756 ntBASIC21.06■□□□□ 0.96
SHC4Q6S5L8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms