Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 INTS3-207ENST00000481797 5741 ntTSL 210.3□□□□□ -0.764e-6■□□□□ 11.3
SRSF1Q07955 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.764e-6■□□□□ 11.3
SRSF1Q07955 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.834e-6■□□□□ 11.3
SRSF1Q07955 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.054e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.93□□□□□ -1.34e-6■□□□□ 11.3
SRSF1Q07955 ANKRD10-204ENST00000463156 395 ntTSL 36.67□□□□□ -1.345e-11■□□□□ 11.3
SRSF1Q07955 PABPC4-210ENST00000470443 1212 ntTSL 56.4□□□□□ -1.384e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-205ENST00000423596 246 ntTSL 56.36□□□□□ -1.394e-6■□□□□ 11.3
SRSF1Q07955 MTF2-206ENST00000473430 760 ntTSL 56.31□□□□□ -1.44e-6■□□□□ 11.3
SRSF1Q07955 PAXBP1-209ENST00000497873 2277 ntTSL 25.84□□□□□ -1.474e-6■□□□□ 11.3
SRSF1Q07955 TRIB3-204ENST00000615226 877 ntTSL 35.69□□□□□ -1.54e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-208ENST00000452550 865 ntAPPRIS ALT2 TSL 55.55□□□□□ -1.524e-6■□□□□ 11.3
SRSF1Q07955 ANKRD10-205ENST00000464579 128 ntTSL 34.73□□□□□ -1.655e-11■□□□□ 11.3
SRSF1Q07955 PAN2-213ENST00000549348 567 ntTSL 44.69□□□□□ -1.664e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-207ENST00000447939 512 ntTSL 24.66□□□□□ -1.664e-6■□□□□ 11.3
SRSF1Q07955 WAC-208ENST00000424454 1330 ntTSL 24.62□□□□□ -1.674e-6■□□□□ 11.3
SRSF1Q07955 WAC-219ENST00000530865 468 ntTSL 24.38□□□□□ -1.714e-6■□□□□ 11.3
SRSF1Q07955 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.36□□□□□ -1.714e-6■□□□□ 11.3
SRSF1Q07955 PAXBP1-203ENST00000421049 339 ntTSL 34.16□□□□□ -1.744e-6■□□□□ 11.3
SRSF1Q07955 WAC-206ENST00000414108 816 ntTSL 34.12□□□□□ -1.754e-6■□□□□ 11.3
SRSF1Q07955 MTF2-212ENST00000497976 760 ntTSL 53.62□□□□□ -1.834e-6■□□□□ 11.3
SRSF1Q07955 PAXBP1-207ENST00000466846 3879 ntTSL 22.82□□□□□ -1.964e-6■□□□□ 11.3
SRSF1Q07955 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.06■■□□□ 1.922e-7■□□□□ 11.3
SRSF1Q07955 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.88■■□□□ 1.892e-7■□□□□ 11.3
SRSF1Q07955 MED15-226ENST00000478831 707 ntTSL 410.87□□□□□ -0.673e-7■□□□□ 11.3
SRSF1Q07955 PGGHG-208ENST00000529087 745 ntTSL 216.15■□□□□ 0.182e-9■□□□□ 11.3
SRSF1Q07955 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.5■□□□□ 0.874e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-225ENST00000621715 816 ntTSL 316.79■□□□□ 0.284e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-203ENST00000439080 1388 ntTSL 215.26■□□□□ 0.034e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-204ENST00000472476 1001 ntTSL 514.48□□□□□ -0.094e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-229ENST00000638264 774 ntTSL 1 (best) BASIC10.03□□□□□ -0.84e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC10.03□□□□□ -0.84e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-226ENST00000621790 1008 ntTSL 5 BASIC10.03□□□□□ -0.84e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-218ENST00000617172 980 ntTSL 59.23□□□□□ -0.934e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-227ENST00000622057 706 ntTSL 59.13□□□□□ -0.954e-8■□□□□ 11.3
SRSF1Q07955 TARDBP-230ENST00000639083 2269 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.044e-8■□□□□ 11.3
SRSF1Q07955 MVD-209ENST00000565149 2352 ntTSL 1 (best)14.83□□□□□ -0.033e-7■□□□□ 11.3
SRSF1Q07955 ACTB-203ENST00000417101 472 ntTSL 421.13■□□□□ 0.977e-11■□□□□ 11.3
SRSF1Q07955 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.21e-8■□□□□ 11.3
SRSF1Q07955 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.131e-8■□□□□ 11.3
SRSF1Q07955 GUK1-237ENST00000495999 555 ntTSL 315.01□□□□□ -0.011e-8■□□□□ 11.3
SRSF1Q07955 GUK1-232ENST00000486668 738 ntTSL 313.13□□□□□ -0.311e-8■□□□□ 11.3
SRSF1Q07955 GUK1-219ENST00000470040 2548 ntTSL 211.95□□□□□ -0.51e-8■□□□□ 11.3
SRSF1Q07955 NAP1L1-220ENST00000551524 460 ntTSL 25.85□□□□□ -1.476e-24■□□□□ 11.3
SRSF1Q07955 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.29■■□□□ 1.648e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.07■□□□□ 0.88e-8■□□□□ 11.3
SRSF1Q07955 U2AF2-204ENST00000587275 554 ntTSL 419.74■□□□□ 0.758e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.68e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.45■□□□□ 0.548e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-205ENST00000535140 638 ntTSL 318.19■□□□□ 0.58e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.358e-8■□□□□ 11.3
SRSF1Q07955 TNPO2-216ENST00000589956 594 ntTSL 517.1■□□□□ 0.338e-8■□□□□ 11.3
SRSF1Q07955 U2AF2-208ENST00000592874 849 ntTSL 516.86■□□□□ 0.298e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.95■□□□□ 0.148e-8■□□□□ 11.3
SRSF1Q07955 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.93■□□□□ 0.148e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.73□□□□□ -0.058e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.188e-8■□□□□ 11.3
SRSF1Q07955 TNPO2-209ENST00000588151 546 ntTSL 313.2□□□□□ -0.38e-8■□□□□ 11.3
SRSF1Q07955 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.1□□□□□ -0.318e-8■□□□□ 11.3
SRSF1Q07955 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.73□□□□□ -0.378e-8■□□□□ 11.3
SRSF1Q07955 OTUB1-201ENST00000301453 2493 ntTSL 212.37□□□□□ -0.438e-8■□□□□ 11.3
SRSF1Q07955 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC7.84□□□□□ -1.158e-8■□□□□ 11.3
SRSF1Q07955 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.498e-8■□□□□ 11.3
SRSF1Q07955 DNAJC16-205ENST00000475133 6299 ntTSL 1 (best)5.08□□□□□ -1.68e-8■□□□□ 11.3
SRSF1Q07955 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.46□□□□□ -1.78e-8■□□□□ 11.3
SRSF1Q07955 LRRC20-207ENST00000446961 663 ntTSL 215.31■□□□□ 0.046e-7■□□□□ 11.3
SRSF1Q07955 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.18□□□□□ -0.146e-7■□□□□ 11.3
SRSF1Q07955 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.34□□□□□ -0.276e-7■□□□□ 11.3
SRSF1Q07955 LRRC20-202ENST00000357631 2906 ntTSL 213.3□□□□□ -0.286e-7■□□□□ 11.3
SRSF1Q07955 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.87□□□□□ -0.356e-7■□□□□ 11.3
SRSF1Q07955 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.576e-7■□□□□ 11.3
SRSF1Q07955 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.666e-7■□□□□ 11.3
SRSF1Q07955 GIGYF2-209ENST00000423659 2329 ntTSL 58.83□□□□□ -12e-8■□□□□ 11.3
SRSF1Q07955 YARS-202ENST00000466052 728 ntTSL 38.99□□□□□ -0.973e-6■□□□□ 11.3
SRSF1Q07955 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.172e-6■□□□□ 11.2
SRSF1Q07955 UAP1-206ENST00000476240 128 ntTSL 215.67■□□□□ 0.12e-6■□□□□ 11.2
SRSF1Q07955 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.132e-6■□□□□ 11.2
SRSF1Q07955 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.62■■□□□ 1.211e-7■□□□□ 11.2
SRSF1Q07955 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.121e-7■□□□□ 11.2
SRSF1Q07955 FTCD-212ENST00000498355 1936 ntTSL 221.93■■□□□ 1.11e-7■□□□□ 11.2
SRSF1Q07955 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.971e-7■□□□□ 11.2
SRSF1Q07955 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.871e-7■□□□□ 11.2
SRSF1Q07955 MRPS5-207ENST00000482568 711 ntTSL 312.1□□□□□ -0.473e-6■□□□□ 11.2
SRSF1Q07955 MRPS5-204ENST00000464458 648 ntTSL 311.81□□□□□ -0.523e-6■□□□□ 11.2
SRSF1Q07955 HNRNPU-228ENST00000640306 2917 ntTSL 512.58□□□□□ -0.48e-8■□□□□ 11.2
SRSF1Q07955 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.655e-8■□□□□ 11.2
SRSF1Q07955 TRMT11-209ENST00000479748 2093 ntTSL 1 (best)12.83□□□□□ -0.362e-6■□□□□ 11.2
SRSF1Q07955 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.412e-6■□□□□ 11.2
SRSF1Q07955 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.422e-6■□□□□ 11.2
SRSF1Q07955 TRMT11-206ENST00000466316 729 ntTSL 54.47□□□□□ -1.692e-6■□□□□ 11.2
SRSF1Q07955 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.782e-7■□□□□ 11.2
SRSF1Q07955 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC10.08□□□□□ -0.82e-7■□□□□ 11.2
SRSF1Q07955 SLC6A6-207ENST00000618278 6401 ntTSL 59.24□□□□□ -0.932e-7■□□□□ 11.2
SRSF1Q07955 SLC6A6-201ENST00000452151 284 ntTSL 57.65□□□□□ -1.182e-7■□□□□ 11.2
SRSF1Q07955 TARDBP-207ENST00000476201 929 ntTSL 514.48□□□□□ -0.095e-8■□□□□ 11.2
SRSF1Q07955 TARDBP-205ENST00000473118 701 ntTSL 36.87□□□□□ -1.315e-8■□□□□ 11.2
SRSF1Q07955 DNM2-222ENST00000593220 561 ntTSL 314.51□□□□□ -0.096e-11■□□□□ 11.2
SRSF1Q07955 DNM2-208ENST00000587329 498 ntTSL 310.1□□□□□ -0.796e-11■□□□□ 11.2
SRSF1Q07955 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.114e-14■□□□□ 11.2
SRSF1Q07955 EIF4A2-218ENST00000475653 909 ntTSL 26.79□□□□□ -1.324e-14■□□□□ 11.2
Retrieved 100 of 14,836 protein–RNA pairs in 86.7 ms