RNA–Protein interactions for RNA: ENST00000421049.1

PAXBP1-203, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 3

Gene PAXBP1, Length 339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-203ENST00000421049 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
PAXBP1-203ENST00000421049 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
PAXBP1-203ENST00000421049 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
PAXBP1-203ENST00000421049 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
PAXBP1-203ENST00000421049 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
PAXBP1-203ENST00000421049 FOXD1Q16676 465 aa16.19■□□□□ 0.18
PAXBP1-203ENST00000421049 ADRA2BP18089 450 aa15.57■□□□□ 0.08
PAXBP1-203ENST00000421049 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
PAXBP1-203ENST00000421049 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
PAXBP1-203ENST00000421049 MSH5O43196 834 aa14.96□□□□□ -0.01
PAXBP1-203ENST00000421049 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
PAXBP1-203ENST00000421049 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
PAXBP1-203ENST00000421049 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
PAXBP1-203ENST00000421049 KCNA4P22459 653 aa14.04□□□□□ -0.16
PAXBP1-203ENST00000421049 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
PAXBP1-203ENST00000421049 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
PAXBP1-203ENST00000421049 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
PAXBP1-203ENST00000421049 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
PAXBP1-203ENST00000421049 NPM3O75607 178 aaKnown RBP13.79□□□□□ -0.2
PAXBP1-203ENST00000421049 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
PAXBP1-203ENST00000421049 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
PAXBP1-203ENST00000421049 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
PAXBP1-203ENST00000421049 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
PAXBP1-203ENST00000421049 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
PAXBP1-203ENST00000421049 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
PAXBP1-203ENST00000421049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.323e-7■■■■□ 19.6
PAXBP1-203ENST00000421049 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
PAXBP1-203ENST00000421049 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
PAXBP1-203ENST00000421049 ZBTB22O15209 634 aa12.91□□□□□ -0.34
PAXBP1-203ENST00000421049 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
PAXBP1-203ENST00000421049 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
PAXBP1-203ENST00000421049 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
PAXBP1-203ENST00000421049 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
PAXBP1-203ENST00000421049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
PAXBP1-203ENST00000421049 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
PAXBP1-203ENST00000421049 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
PAXBP1-203ENST00000421049 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
PAXBP1-203ENST00000421049 APLP2Q06481 763 aa12.55□□□□□ -0.4
PAXBP1-203ENST00000421049 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
PAXBP1-203ENST00000421049 CAPN15O75808 1086 aa12.45□□□□□ -0.42
PAXBP1-203ENST00000421049 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
PAXBP1-203ENST00000421049 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
PAXBP1-203ENST00000421049 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
PAXBP1-203ENST00000421049 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
PAXBP1-203ENST00000421049 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
PAXBP1-203ENST00000421049 ABCB7O75027 752 aa12.22□□□□□ -0.45
PAXBP1-203ENST00000421049 DSG3P32926 999 aa12.17□□□□□ -0.46
PAXBP1-203ENST00000421049 POLA2Q14181 598 aa12.14□□□□□ -0.47
PAXBP1-203ENST00000421049 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
PAXBP1-203ENST00000421049 FBLN2P98095 1184 aa11.94□□□□□ -0.5
PAXBP1-203ENST00000421049 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
PAXBP1-203ENST00000421049 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
PAXBP1-203ENST00000421049 FKBP8Q14318 412 aa11.66□□□□□ -0.54
PAXBP1-203ENST00000421049 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
PAXBP1-203ENST00000421049 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
PAXBP1-203ENST00000421049 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
PAXBP1-203ENST00000421049 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
PAXBP1-203ENST00000421049 SPDYE2Q495Y8 402 aa11.61□□□□□ -0.55
PAXBP1-203ENST00000421049 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
PAXBP1-203ENST00000421049 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
PAXBP1-203ENST00000421049 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
PAXBP1-203ENST00000421049 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
PAXBP1-203ENST00000421049 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
PAXBP1-203ENST00000421049 PROM2Q8N271 834 aa11.35□□□□□ -0.59
PAXBP1-203ENST00000421049 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
PAXBP1-203ENST00000421049 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
PAXBP1-203ENST00000421049 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
PAXBP1-203ENST00000421049 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
PAXBP1-203ENST00000421049 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
PAXBP1-203ENST00000421049 CHRDL2Q6WN34 429 aa11.15□□□□□ -0.62
PAXBP1-203ENST00000421049 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
PAXBP1-203ENST00000421049 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
PAXBP1-203ENST00000421049 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
PAXBP1-203ENST00000421049 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
PAXBP1-203ENST00000421049 MIER1Q8N108 512 aa11.02□□□□□ -0.65
PAXBP1-203ENST00000421049 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
PAXBP1-203ENST00000421049 FXR2P51116 673 aaKnown RBP eCLIP10.99□□□□□ -0.65
PAXBP1-203ENST00000421049 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
PAXBP1-203ENST00000421049 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
PAXBP1-203ENST00000421049 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
PAXBP1-203ENST00000421049 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
PAXBP1-203ENST00000421049 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
PAXBP1-203ENST00000421049 IFNLR1Q8IU57 520 aaPredicted RBP10.89□□□□□ -0.67
PAXBP1-203ENST00000421049 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
PAXBP1-203ENST00000421049 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
PAXBP1-203ENST00000421049 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
PAXBP1-203ENST00000421049 POTEHQ6S545 545 aa10.8□□□□□ -0.68
PAXBP1-203ENST00000421049 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
PAXBP1-203ENST00000421049 NUBP1P53384 320 aa10.7□□□□□ -0.7
PAXBP1-203ENST00000421049 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
PAXBP1-203ENST00000421049 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
PAXBP1-203ENST00000421049 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
PAXBP1-203ENST00000421049 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
PAXBP1-203ENST00000421049 HAX1O00165 279 aa10.67□□□□□ -0.7
PAXBP1-203ENST00000421049 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
PAXBP1-203ENST00000421049 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
PAXBP1-203ENST00000421049 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
PAXBP1-203ENST00000421049 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
PAXBP1-203ENST00000421049 GSE1Q14687 1217 aa10.62□□□□□ -0.71
PAXBP1-203ENST00000421049 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms