RNA–Protein interactions for RNA: ENST00000447939.1

SH3BGR-207, Transcript of SH3 domain binding glutamate rich protein, humanhuman

TSL 2

Gene SH3BGR, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGR-207ENST00000447939 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SH3BGR-207ENST00000447939 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
SH3BGR-207ENST00000447939 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
SH3BGR-207ENST00000447939 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
SH3BGR-207ENST00000447939 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
SH3BGR-207ENST00000447939 FOXD1Q16676 465 aa17.72■□□□□ 0.43
SH3BGR-207ENST00000447939 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
SH3BGR-207ENST00000447939 ADRA2BP18089 450 aa17.07■□□□□ 0.32
SH3BGR-207ENST00000447939 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
SH3BGR-207ENST00000447939 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
SH3BGR-207ENST00000447939 MSH5O43196 834 aa16.34■□□□□ 0.21
SH3BGR-207ENST00000447939 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
SH3BGR-207ENST00000447939 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
SH3BGR-207ENST00000447939 KCNA4P22459 653 aa15.51■□□□□ 0.07
SH3BGR-207ENST00000447939 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
SH3BGR-207ENST00000447939 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
SH3BGR-207ENST00000447939 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
SH3BGR-207ENST00000447939 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.04
SH3BGR-207ENST00000447939 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
SH3BGR-207ENST00000447939 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
SH3BGR-207ENST00000447939 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
SH3BGR-207ENST00000447939 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
SH3BGR-207ENST00000447939 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
SH3BGR-207ENST00000447939 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
SH3BGR-207ENST00000447939 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
SH3BGR-207ENST00000447939 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
SH3BGR-207ENST00000447939 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
SH3BGR-207ENST00000447939 ZBTB22O15209 634 aa14.27□□□□□ -0.13
SH3BGR-207ENST00000447939 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
SH3BGR-207ENST00000447939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
SH3BGR-207ENST00000447939 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
SH3BGR-207ENST00000447939 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
SH3BGR-207ENST00000447939 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
SH3BGR-207ENST00000447939 RNF39Q9H2S5 420 aa14□□□□□ -0.17
SH3BGR-207ENST00000447939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
SH3BGR-207ENST00000447939 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
SH3BGR-207ENST00000447939 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
SH3BGR-207ENST00000447939 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
SH3BGR-207ENST00000447939 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
SH3BGR-207ENST00000447939 APLP2Q06481 763 aa13.74□□□□□ -0.21
SH3BGR-207ENST00000447939 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
SH3BGR-207ENST00000447939 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
SH3BGR-207ENST00000447939 CAPN15O75808 1086 aa13.57□□□□□ -0.24
SH3BGR-207ENST00000447939 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
SH3BGR-207ENST00000447939 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SH3BGR-207ENST00000447939 POTEHQ6S545 545 aa13.47□□□□□ -0.25
SH3BGR-207ENST00000447939 DSG3P32926 999 aa13.33□□□□□ -0.28
SH3BGR-207ENST00000447939 ABCB7O75027 752 aa13.32□□□□□ -0.28
SH3BGR-207ENST00000447939 POLA2Q14181 598 aa13.3□□□□□ -0.28
SH3BGR-207ENST00000447939 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
SH3BGR-207ENST00000447939 FBLN2P98095 1184 aa13.08□□□□□ -0.32
SH3BGR-207ENST00000447939 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
SH3BGR-207ENST00000447939 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
SH3BGR-207ENST00000447939 FKBP8Q14318 412 aa12.86□□□□□ -0.35
SH3BGR-207ENST00000447939 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
SH3BGR-207ENST00000447939 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
SH3BGR-207ENST00000447939 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
SH3BGR-207ENST00000447939 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
SH3BGR-207ENST00000447939 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
SH3BGR-207ENST00000447939 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
SH3BGR-207ENST00000447939 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
SH3BGR-207ENST00000447939 PROM2Q8N271 834 aa12.61□□□□□ -0.39
SH3BGR-207ENST00000447939 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
SH3BGR-207ENST00000447939 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
SH3BGR-207ENST00000447939 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
SH3BGR-207ENST00000447939 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
SH3BGR-207ENST00000447939 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
SH3BGR-207ENST00000447939 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
SH3BGR-207ENST00000447939 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
SH3BGR-207ENST00000447939 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
SH3BGR-207ENST00000447939 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
SH3BGR-207ENST00000447939 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
SH3BGR-207ENST00000447939 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
SH3BGR-207ENST00000447939 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
SH3BGR-207ENST00000447939 MIER1Q8N108 512 aa12.1□□□□□ -0.47
SH3BGR-207ENST00000447939 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
SH3BGR-207ENST00000447939 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
SH3BGR-207ENST00000447939 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
SH3BGR-207ENST00000447939 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.48
SH3BGR-207ENST00000447939 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
SH3BGR-207ENST00000447939 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
SH3BGR-207ENST00000447939 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
SH3BGR-207ENST00000447939 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
SH3BGR-207ENST00000447939 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
SH3BGR-207ENST00000447939 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
SH3BGR-207ENST00000447939 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
SH3BGR-207ENST00000447939 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
SH3BGR-207ENST00000447939 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
SH3BGR-207ENST00000447939 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
SH3BGR-207ENST00000447939 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
SH3BGR-207ENST00000447939 NUBP1P53384 320 aa11.81□□□□□ -0.52
SH3BGR-207ENST00000447939 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
SH3BGR-207ENST00000447939 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
SH3BGR-207ENST00000447939 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
SH3BGR-207ENST00000447939 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
SH3BGR-207ENST00000447939 NISCHQ9Y2I1 1504 aa11.7□□□□□ -0.54
SH3BGR-207ENST00000447939 GSE1Q14687 1217 aa11.7□□□□□ -0.54
SH3BGR-207ENST00000447939 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
SH3BGR-207ENST00000447939 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
SH3BGR-207ENST00000447939 PKD2Q13563 968 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms