Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PDE1AP54750 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.81■■□□□ 1.24
PDE1AP54750 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.81■■□□□ 1.24
PDE1AP54750 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PDE1AP54750 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 AC135050.7-201ENST00000624508 2218 ntBASIC22.81■■□□□ 1.24
PDE1AP54750 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDE1AP54750 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 BX088651.1-201ENST00000540551 451 ntBASIC22.8■■□□□ 1.24
PDE1AP54750 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.8■■□□□ 1.24
PDE1AP54750 CR769767.2-201ENST00000622735 460 ntBASIC22.8■■□□□ 1.24
PDE1AP54750 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 MYC-208ENST00000641036 567 ntBASIC22.8■■□□□ 1.24
PDE1AP54750 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PDE1AP54750 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 MYLKP1-201ENST00000509077 1580 ntBASIC22.8■■□□□ 1.24
PDE1AP54750 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.8■■□□□ 1.24
PDE1AP54750 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDE1AP54750 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PDE1AP54750 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.79■■□□□ 1.24
PDE1AP54750 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 AC034236.2-201ENST00000606662 1610 ntBASIC22.79■■□□□ 1.24
PDE1AP54750 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.79■■□□□ 1.24
PDE1AP54750 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.79■■□□□ 1.24
PDE1AP54750 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PDE1AP54750 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
PDE1AP54750 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.79■■□□□ 1.24
PDE1AP54750 AC010653.2-201ENST00000623505 997 ntBASIC22.79■■□□□ 1.24
PDE1AP54750 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.79■■□□□ 1.24
PDE1AP54750 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PDE1AP54750 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.79■■□□□ 1.24
PDE1AP54750 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.79■■□□□ 1.24
PDE1AP54750 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
PDE1AP54750 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDE1AP54750 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PDE1AP54750 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PDE1AP54750 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
PDE1AP54750 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 KRT8P50-201ENST00000562022 1438 ntBASIC22.78■■□□□ 1.24
PDE1AP54750 WWOX-216ENST00000569818 525 ntBASIC22.78■■□□□ 1.24
PDE1AP54750 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.78■■□□□ 1.24
PDE1AP54750 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.78■■□□□ 1.24
PDE1AP54750 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.78■■□□□ 1.24
PDE1AP54750 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDE1AP54750 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.77■■□□□ 1.24
PDE1AP54750 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDE1AP54750 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDE1AP54750 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.77■■□□□ 1.24
PDE1AP54750 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms