Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC112229.1-201ENST00000639295 961 ntBASIC13.76□□□□□ -0.21
CKS2P33552 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CKS2P33552 AC009053.2-201ENST00000563701 2365 ntBASIC13.76□□□□□ -0.21
CKS2P33552 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 AC099398.1-201ENST00000567919 2776 ntBASIC13.76□□□□□ -0.21
CKS2P33552 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CKS2P33552 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CKS2P33552 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CKS2P33552 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CKS2P33552 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CKS2P33552 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 AC008406.3-201ENST00000620001 1374 ntBASIC13.75□□□□□ -0.21
CKS2P33552 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CKS2P33552 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.75□□□□□ -0.21
CKS2P33552 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.75□□□□□ -0.21
CKS2P33552 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.75□□□□□ -0.21
CKS2P33552 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.75□□□□□ -0.21
CKS2P33552 AC007322.4-201ENST00000509611 723 ntBASIC13.75□□□□□ -0.21
CKS2P33552 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.75□□□□□ -0.21
CKS2P33552 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
CKS2P33552 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.75□□□□□ -0.21
CKS2P33552 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CKS2P33552 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
CKS2P33552 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.75□□□□□ -0.21
CKS2P33552 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CKS2P33552 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CKS2P33552 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.74□□□□□ -0.21
CKS2P33552 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CKS2P33552 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.74□□□□□ -0.21
CKS2P33552 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.74□□□□□ -0.21
CKS2P33552 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CKS2P33552 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CKS2P33552 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.74□□□□□ -0.21
CKS2P33552 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.74□□□□□ -0.21
CKS2P33552 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.74□□□□□ -0.21
CKS2P33552 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.74□□□□□ -0.21
CKS2P33552 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.74□□□□□ -0.21
CKS2P33552 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.74□□□□□ -0.21
CKS2P33552 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CKS2P33552 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CKS2P33552 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.74□□□□□ -0.21
CKS2P33552 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms