Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP24386 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHMP24386 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP24386 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP24386 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP24386 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP24386 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP24386 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP24386 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 MIR6786-201ENST00000616843 113 ntBASIC17.47■□□□□ 0.39
CHMP24386 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP24386 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP24386 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHMP24386 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP24386 PCDHB18P-201ENST00000524813 2368 ntBASIC17.47■□□□□ 0.39
CHMP24386 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP24386 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP24386 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP24386 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP24386 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CHMP24386 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP24386 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP24386 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CHMP24386 RBM17P1-201ENST00000453646 1190 ntBASIC17.46■□□□□ 0.39
CHMP24386 B3GAT3P1-201ENST00000471720 806 ntBASIC17.46■□□□□ 0.39
CHMP24386 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP24386 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP24386 DGCR10-201ENST00000609839 495 ntBASIC17.46■□□□□ 0.39
CHMP24386 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHMP24386 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP24386 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.46■□□□□ 0.38
CHMP24386 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.46■□□□□ 0.38
CHMP24386 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
CHMP24386 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHMP24386 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.46■□□□□ 0.38
CHMP24386 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
CHMP24386 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP24386 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP24386 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 FEM1AP3-201ENST00000403722 1741 ntBASIC17.45■□□□□ 0.38
CHMP24386 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMP24386 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 MESTP1-201ENST00000404287 994 ntBASIC17.45■□□□□ 0.38
CHMP24386 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.45■□□□□ 0.38
CHMP24386 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 LINC01023-201ENST00000606054 436 ntBASIC17.45■□□□□ 0.38
CHMP24386 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP24386 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHMP24386 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms