Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ATF1P18846 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.42■□□□□ 0.22
ATF1P18846 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.42■□□□□ 0.22
ATF1P18846 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.42■□□□□ 0.22
ATF1P18846 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.42■□□□□ 0.22
ATF1P18846 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.42■□□□□ 0.22
ATF1P18846 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.42■□□□□ 0.22
ATF1P18846 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATF1P18846 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.42■□□□□ 0.22
ATF1P18846 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.42■□□□□ 0.22
ATF1P18846 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.42■□□□□ 0.22
ATF1P18846 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
ATF1P18846 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ATF1P18846 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATF1P18846 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ATF1P18846 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.41■□□□□ 0.22
ATF1P18846 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ATF1P18846 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.41■□□□□ 0.22
ATF1P18846 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATF1P18846 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATF1P18846 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 TSPY21P-201ENST00000433481 731 ntBASIC16.41■□□□□ 0.22
ATF1P18846 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.41■□□□□ 0.22
ATF1P18846 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.41■□□□□ 0.22
ATF1P18846 AL160286.2-201ENST00000567150 934 ntBASIC16.41■□□□□ 0.22
ATF1P18846 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.41■□□□□ 0.22
ATF1P18846 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.41■□□□□ 0.22
ATF1P18846 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.41■□□□□ 0.22
ATF1P18846 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ATF1P18846 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATF1P18846 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
ATF1P18846 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.41■□□□□ 0.22
ATF1P18846 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATF1P18846 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATF1P18846 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATF1P18846 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATF1P18846 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.4■□□□□ 0.22
ATF1P18846 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATF1P18846 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATF1P18846 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ATF1P18846 AC134043.2-201ENST00000624206 2238 ntBASIC16.4■□□□□ 0.22
ATF1P18846 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATF1P18846 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.4■□□□□ 0.22
ATF1P18846 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.4■□□□□ 0.22
ATF1P18846 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 C1QL1P1-201ENST00000568105 661 ntBASIC16.4■□□□□ 0.22
ATF1P18846 AC004264.1-201ENST00000608354 794 ntBASIC16.4■□□□□ 0.22
ATF1P18846 HLA-A-209ENST00000638375 975 ntBASIC16.4■□□□□ 0.22
ATF1P18846 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.4■□□□□ 0.22
ATF1P18846 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.4■□□□□ 0.22
ATF1P18846 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.4■□□□□ 0.22
ATF1P18846 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ATF1P18846 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATF1P18846 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATF1P18846 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
ATF1P18846 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATF1P18846 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATF1P18846 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms