Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HLA-EP13747 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-EP13747 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-EP13747 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-EP13747 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HLA-EP13747 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-EP13747 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-EP13747 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.88■□□□□ 0.61
HLA-EP13747 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.88■□□□□ 0.61
HLA-EP13747 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-EP13747 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.88■□□□□ 0.61
HLA-EP13747 AL136038.4-201ENST00000603606 1261 ntBASIC18.88■□□□□ 0.61
HLA-EP13747 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HLA-EP13747 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-EP13747 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-EP13747 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-EP13747 AL391807.1-203ENST00000604392 2365 ntBASIC18.88■□□□□ 0.61
HLA-EP13747 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-EP13747 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HLA-EP13747 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HLA-EP13747 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.87■□□□□ 0.61
HLA-EP13747 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-EP13747 AC010240.3-201ENST00000607688 395 ntBASIC18.87■□□□□ 0.61
HLA-EP13747 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-EP13747 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-EP13747 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.86■□□□□ 0.61
HLA-EP13747 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 AC006333.2-201ENST00000607957 2099 ntBASIC18.86■□□□□ 0.61
HLA-EP13747 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-EP13747 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
HLA-EP13747 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-EP13747 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-EP13747 HLA-F-220ENST00000434407 884 ntBASIC18.86■□□□□ 0.61
HLA-EP13747 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-EP13747 AC104390.1-201ENST00000555663 520 ntBASIC18.86■□□□□ 0.61
HLA-EP13747 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-EP13747 AC092119.3-201ENST00000612618 583 ntBASIC18.86■□□□□ 0.61
HLA-EP13747 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-EP13747 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-EP13747 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
HLA-EP13747 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-EP13747 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-EP13747 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-EP13747 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.85■□□□□ 0.61
HLA-EP13747 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 HOXB1-202ENST00000577092 1414 ntBASIC18.85■□□□□ 0.61
HLA-EP13747 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HLA-EP13747 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HLA-EP13747 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-EP13747 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-EP13747 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
HLA-EP13747 DUSP5P1-201ENST00000441325 1139 ntBASIC18.85■□□□□ 0.61
HLA-EP13747 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-EP13747 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms