Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
BCKDHAP12694 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BCKDHAP12694 RCC2P3-201ENST00000418112 1537 ntBASIC17.88■□□□□ 0.45
BCKDHAP12694 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
BCKDHAP12694 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
BCKDHAP12694 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.87■□□□□ 0.45
BCKDHAP12694 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
BCKDHAP12694 AC026471.1-201ENST00000564629 3026 ntBASIC17.87■□□□□ 0.45
BCKDHAP12694 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
BCKDHAP12694 FAM207BP-201ENST00000447172 505 ntBASIC17.87■□□□□ 0.45
BCKDHAP12694 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BCKDHAP12694 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.87■□□□□ 0.45
BCKDHAP12694 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.87■□□□□ 0.45
BCKDHAP12694 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.87■□□□□ 0.45
BCKDHAP12694 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
BCKDHAP12694 AC112777.1-201ENST00000540175 1423 ntBASIC17.87■□□□□ 0.45
BCKDHAP12694 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.87■□□□□ 0.45
BCKDHAP12694 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
BCKDHAP12694 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
BCKDHAP12694 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BCKDHAP12694 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
BCKDHAP12694 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.86■□□□□ 0.45
BCKDHAP12694 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
BCKDHAP12694 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 MYC-208ENST00000641036 567 ntBASIC17.86■□□□□ 0.45
BCKDHAP12694 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.86■□□□□ 0.45
BCKDHAP12694 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.86■□□□□ 0.45
BCKDHAP12694 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BCKDHAP12694 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 KRT8P45-201ENST00000414328 1447 ntBASIC17.85■□□□□ 0.45
BCKDHAP12694 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 B3GAT3P1-201ENST00000471720 806 ntBASIC17.85■□□□□ 0.45
BCKDHAP12694 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
BCKDHAP12694 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.85■□□□□ 0.45
BCKDHAP12694 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BCKDHAP12694 MIR6786-201ENST00000616843 113 ntBASIC17.85■□□□□ 0.45
BCKDHAP12694 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BCKDHAP12694 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.85■□□□□ 0.45
BCKDHAP12694 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BCKDHAP12694 AC005332.8-201ENST00000622750 2735 ntBASIC17.85■□□□□ 0.45
BCKDHAP12694 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
BCKDHAP12694 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BCKDHAP12694 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BCKDHAP12694 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BCKDHAP12694 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
BCKDHAP12694 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BCKDHAP12694 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.84■□□□□ 0.45
BCKDHAP12694 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.84■□□□□ 0.45
BCKDHAP12694 NOC2LP2-201ENST00000407594 1944 ntBASIC17.84■□□□□ 0.45
BCKDHAP12694 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms