Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 AC135050.7-201ENST00000624508 2218 ntBASIC17.98■□□□□ 0.47
PRAMEF4O60810 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.98■□□□□ 0.47
PRAMEF4O60810 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 MCCD1P1-208ENST00000445732 328 ntBASIC17.98■□□□□ 0.47
PRAMEF4O60810 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.98■□□□□ 0.47
PRAMEF4O60810 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 AC007613.1-201ENST00000572811 2597 ntBASIC17.98■□□□□ 0.47
PRAMEF4O60810 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.98■□□□□ 0.47
PRAMEF4O60810 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEF4O60810 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 SLC25A1P2-201ENST00000430693 912 ntBASIC17.97■□□□□ 0.47
PRAMEF4O60810 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 AC010947.1-201ENST00000623454 693 ntBASIC17.97■□□□□ 0.47
PRAMEF4O60810 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF4O60810 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF4O60810 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 AC007663.1-201ENST00000438948 1240 ntBASIC17.96■□□□□ 0.47
PRAMEF4O60810 KRT18P41-201ENST00000518924 1277 ntBASIC17.96■□□□□ 0.47
PRAMEF4O60810 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF4O60810 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF4O60810 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRAMEF4O60810 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PRAMEF4O60810 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF4O60810 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEF4O60810 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF4O60810 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms