Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 AL499627.1-201ENST00000569373 2188 ntBASIC17.86■□□□□ 0.45
PCDH7O60245 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH7O60245 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 MFAP1P1-201ENST00000442257 1255 ntBASIC17.86■□□□□ 0.45
PCDH7O60245 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH7O60245 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH7O60245 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH7O60245 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH7O60245 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH7O60245 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH7O60245 AL357033.4-201ENST00000617703 1807 ntBASIC17.86■□□□□ 0.45
PCDH7O60245 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH7O60245 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PCDH7O60245 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDH7O60245 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PCDH7O60245 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDH7O60245 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDH7O60245 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDH7O60245 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH7O60245 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH7O60245 BCL2-203ENST00000589955 5011 ntBASIC17.84■□□□□ 0.45
PCDH7O60245 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDH7O60245 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 AC073592.3-201ENST00000625118 1834 ntBASIC17.84■□□□□ 0.45
PCDH7O60245 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH7O60245 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH7O60245 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH7O60245 AL355355.2-201ENST00000442321 338 ntBASIC17.84■□□□□ 0.45
PCDH7O60245 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 AC097488.1-201ENST00000507834 756 ntBASIC17.84■□□□□ 0.45
PCDH7O60245 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH7O60245 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 REXO1L10P-201ENST00000615707 1290 ntBASIC17.84■□□□□ 0.45
PCDH7O60245 REXO1L12P-201ENST00000622156 912 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms