Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 NIFKP9-201ENST00000419265 221 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 TSPY23P-201ENST00000440136 739 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.48■□□□□ 0.39
AP3D1O14617 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 AC098590.1-201ENST00000468126 897 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 AP002982.1-201ENST00000492365 877 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.48■□□□□ 0.39
AP3D1O14617 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 AL445675.2-201ENST00000620291 557 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 NOC2LP1-202ENST00000452600 2235 ntBASIC17.48■□□□□ 0.39
AP3D1O14617 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
AP3D1O14617 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.47■□□□□ 0.39
AP3D1O14617 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.47■□□□□ 0.39
AP3D1O14617 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.47■□□□□ 0.39
AP3D1O14617 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.47■□□□□ 0.39
AP3D1O14617 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.47■□□□□ 0.39
AP3D1O14617 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
AP3D1O14617 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AP3D1O14617 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3D1O14617 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3D1O14617 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3D1O14617 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
AP3D1O14617 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.46■□□□□ 0.39
AP3D1O14617 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP3D1O14617 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP3D1O14617 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.46■□□□□ 0.39
AP3D1O14617 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 AC004980.1-204ENST00000429707 299 ntBASIC17.46■□□□□ 0.39
AP3D1O14617 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.46■□□□□ 0.39
AP3D1O14617 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.46■□□□□ 0.39
AP3D1O14617 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
AP3D1O14617 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
AP3D1O14617 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.46■□□□□ 0.39
AP3D1O14617 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.46■□□□□ 0.39
AP3D1O14617 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 AC090164.3-201ENST00000610780 2143 ntBASIC17.46■□□□□ 0.39
AP3D1O14617 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3D1O14617 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3D1O14617 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3D1O14617 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
AP3D1O14617 AC012313.1-201ENST00000593393 3059 ntBASIC17.46■□□□□ 0.38
AP3D1O14617 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms