Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.89■□□□□ 0.61
AP3B1O00203 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
AP3B1O00203 AP000593.1-201ENST00000393668 712 ntBASIC18.89■□□□□ 0.61
AP3B1O00203 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.89■□□□□ 0.61
AP3B1O00203 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.89■□□□□ 0.61
AP3B1O00203 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
AP3B1O00203 AC233702.5-201ENST00000584107 538 ntBASIC18.89■□□□□ 0.61
AP3B1O00203 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.89■□□□□ 0.61
AP3B1O00203 AC104581.1-202ENST00000635932 2618 ntBASIC18.89■□□□□ 0.61
AP3B1O00203 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
AP3B1O00203 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.89■□□□□ 0.61
AP3B1O00203 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.88■□□□□ 0.61
AP3B1O00203 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.88■□□□□ 0.61
AP3B1O00203 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.88■□□□□ 0.61
AP3B1O00203 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.88■□□□□ 0.61
AP3B1O00203 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP3B1O00203 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.88■□□□□ 0.61
AP3B1O00203 SLC25A1P4-201ENST00000567977 778 ntBASIC18.88■□□□□ 0.61
AP3B1O00203 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.88■□□□□ 0.61
AP3B1O00203 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.88■□□□□ 0.61
AP3B1O00203 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
AP3B1O00203 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
AP3B1O00203 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.88■□□□□ 0.61
AP3B1O00203 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
AP3B1O00203 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
AP3B1O00203 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
AP3B1O00203 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
AP3B1O00203 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3B1O00203 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.87■□□□□ 0.61
AP3B1O00203 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.87■□□□□ 0.61
AP3B1O00203 NEFHP1-201ENST00000412845 2629 ntBASIC18.87■□□□□ 0.61
AP3B1O00203 MFAP1P1-201ENST00000442257 1255 ntBASIC18.87■□□□□ 0.61
AP3B1O00203 AL158047.1-201ENST00000445918 881 ntBASIC18.87■□□□□ 0.61
AP3B1O00203 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.87■□□□□ 0.61
AP3B1O00203 AC126763.1-201ENST00000552015 2118 ntBASIC18.87■□□□□ 0.61
AP3B1O00203 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.87■□□□□ 0.61
AP3B1O00203 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.87■□□□□ 0.61
AP3B1O00203 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AP3B1O00203 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.87■□□□□ 0.61
AP3B1O00203 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3B1O00203 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.87■□□□□ 0.61
AP3B1O00203 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.87■□□□□ 0.61
AP3B1O00203 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 AL355355.2-201ENST00000442321 338 ntBASIC18.86■□□□□ 0.61
AP3B1O00203 AC098590.1-201ENST00000468126 897 ntBASIC18.86■□□□□ 0.61
AP3B1O00203 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.86■□□□□ 0.61
AP3B1O00203 AC097488.1-201ENST00000507834 756 ntBASIC18.86■□□□□ 0.61
AP3B1O00203 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.86■□□□□ 0.61
AP3B1O00203 AL049637.2-201ENST00000641778 930 ntBASIC18.86■□□□□ 0.61
AP3B1O00203 AL390961.4-201ENST00000623958 2535 ntBASIC18.86■□□□□ 0.61
AP3B1O00203 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms