Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RBFOX3A6NFN3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 AC099791.1-201ENST00000416440 715 ntBASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 AC096631.2-201ENST00000436136 790 ntBASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 AL136162.1-201ENST00000607711 1078 ntBASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
RBFOX3A6NFN3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 AL139246.5-201ENST00000606645 996 ntBASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 AC093677.2-201ENST00000600169 1863 ntBASIC14.76□□□□□ -0.05
RBFOX3A6NFN3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 AC116351.2-201ENST00000606540 1585 ntBASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RBFOX3A6NFN3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms