Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 YBX1P1-201ENST00000445822 960 ntBASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AL136162.1-201ENST00000607711 1078 ntBASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 AC019069.1-201ENST00000610008 1333 ntBASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV13-2A0A0B4J235 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 AL591742.1-201ENST00000604433 565 ntBASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 AC138028.4-201ENST00000564984 1845 ntBASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV13-2A0A0B4J235 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TRAV13-2A0A0B4J235 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.33□□□□□ -0.43
TRAV13-2A0A0B4J235 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 AC084018.2-201ENST00000613093 2607 ntBASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms