Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TSPY22P-201ENST00000427496 604 ntBASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 AL390719.2-201ENST00000606993 987 ntBASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.52■■□□□ 1.03
SYNPO2Q9UMS6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 AP002383.4-201ENST00000442518 975 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 AP003733.1-201ENST00000491725 852 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 RNF126P1-202ENST00000569893 925 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 MIR3180-1-201ENST00000580374 94 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 MIR3180-3-201ENST00000584616 94 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 AC024563.2-201ENST00000603282 481 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 AC112777.1-201ENST00000540175 1423 ntBASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SYNPO2Q9UMS6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 MIR149-201ENST00000384879 89 ntBASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 AC008687.5-201ENST00000593746 558 ntBASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPO2Q9UMS6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 AL049812.1-201ENST00000432563 2267 ntBASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 IGHGP-201ENST00000390555 1178 ntBASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 KRT126P-201ENST00000549467 1181 ntBASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 GPR32P1-201ENST00000601788 811 ntBASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPO2Q9UMS6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms