Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBP1Q9NZI7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 AC009113.1-201ENST00000570267 2443 ntBASIC19.06■□□□□ 0.64
UBP1Q9NZI7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 AC005082.1-201ENST00000413042 2259 ntBASIC19.06■□□□□ 0.64
UBP1Q9NZI7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBP1Q9NZI7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.05■□□□□ 0.64
UBP1Q9NZI7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms