Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 GPX1P1-201ENST00000388829 606 ntBASIC18.12■□□□□ 0.49
NDE1Q9NXR1 TSPY21P-201ENST00000433481 731 ntBASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AC005837.3-201ENST00000612163 286 ntBASIC18.12■□□□□ 0.49
NDE1Q9NXR1 OR10C1-204ENST00000622521 1039 ntBASIC18.12■□□□□ 0.49
NDE1Q9NXR1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDE1Q9NXR1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 AC012317.2-201ENST00000623305 2251 ntBASIC18.1■□□□□ 0.49
NDE1Q9NXR1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 MYC-208ENST00000641036 567 ntBASIC18.1■□□□□ 0.49
NDE1Q9NXR1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDE1Q9NXR1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 KRT17P1-201ENST00000399211 1546 ntBASIC18.09■□□□□ 0.49
NDE1Q9NXR1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.09■□□□□ 0.49
NDE1Q9NXR1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms