Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 AC087388.1-201ENST00000571370 1112 ntBASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VAT1LQ9HCJ6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 AC068587.9-201ENST00000641814 219 ntBASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VAT1LQ9HCJ6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 MIR564-202ENST00000385049 94 ntBASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 AP000523.1-201ENST00000398242 1049 ntBASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 KRT18P38-201ENST00000449496 1282 ntBASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
VAT1LQ9HCJ6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 FAM8A6P-201ENST00000407496 1135 ntBASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
VAT1LQ9HCJ6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms